综述 Review

早期瘤胃微生物区系发育及其调控

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  • 西南大学动物科技学院, 重庆市牧草与草食家畜重点实验室, 重庆 400716
田可(1995-),男,重庆人,硕士研究生,从事反刍动物营养研究。E-mail:tiankekeke@qq.com

收稿日期: 2018-05-17

  网络出版日期: 2018-12-19

基金资助

重庆市社会民生科技创新专项(cstc2016shmszx80078);重庆市基础科学与前沿技术研究项目(cstc2017jcyjBX0015)

Development and Manipulation of Rumen Microbiota during Early-Life

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  • Chongqing Key Laboratory of Forage and Herbivores, College of Animal Science and Technology, Southwest University, Chongqing 400716, China

Received date: 2018-05-17

  Online published: 2018-12-19

摘要

反刍动物瘤胃中存在着大量微生物,为动物维持和生产提供所需能量和营养。通过调节瘤胃微生物区系可提高瘤胃对饲料的利用效率和减少代谢副产物的排放,从而最终提高反刍动物养殖的整体经济效益,同时减少养殖对环境的污染。近年来研究表明,瘤胃微生物区系对幼龄动物的营养代谢和生长发育极为重要。本文旨在综述反刍动物早期瘤胃微生物区系的发育及调控效果,为早期瘤胃微生物区系调控在实际生产中的应用提供参考。

本文引用格式

田可, 柳君辉, 董国忠 . 早期瘤胃微生物区系发育及其调控[J]. 动物营养学报, 2018 , 30(12) : 4828 -4834 . DOI: 10.3969/j.issn.1006-267x.2018.12.009

Abstract

The rumen harbors a great diversity of microorganisms that provide energy and nutrients for both maintenance and production of ruminant animals. Manipulating rumen microbiota could increase feed utilization and decrease metabolic by-products in the rumen, resulting in enhanced economic benefits and reduced pollution in ruminant production. Recent studies showed that rumen microbiota were very important for nutritional metabolism and body development of young ruminant animals. This article reviewed the development and manipulation of early-life rumen microbiota, so as to provide a reference for the application of early-life rumen microbiota manipulation in practical ruminant production.

参考文献

[1] NAGARAJA T G.Microbiology of the rumen[M]//MILLEN D D,DE BENI ARRIGONI M,PACHECO R D L.Rumenology.Botucatu:Springer International Publishing,2016:41-42.



[2] ZOETENDAL E G,COLLIER C T,KOIKE S,et al.Molecular ecological analysis of the gastrointestinal microbiota:a review[J].Journal of Nutrition,2004,134(2):465-472.  



[3] DE ALMEIDA P N M,DUARTE E R,ABRÄO F O,et al.Aerobic fungi in the rumen fluid from dairy cattle fed different sources of forage[J].Revista Brasileira de Zootecnia,2012,41(11):2336-2342.  



[4] GUZMAN C E,BEREZA-MALCOLM L T,DE GROEF B,et al.Presence of selected methanogens,fibrolytic bacteria,and proteobacteria in the gastrointestinal tract of neonatal dairy calves from birth to 72 hours[J].PLoS One,2015,10(7):e0133048.



[5] REY M,ENJALBERT F,COMBES S,et al.Establishment of ruminal bacterial community in dairy calves from birth to weaning is sequential[J].Journal of Applied Microbiology,2014,116(2):245-257.  



[6] ABECIA L,RAMOS-MORALES E,MARTÍNEZ-FERNANDEZ G,et al.Feeding management in early life influences microbial colonisation and fermentation in the rumen of newborn goat kids[J].Animal Production Science,2014,54(9):1449-1454.  



[7] LI R W,CONNOR E E,LI C J,et al.Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools[J].Environmental Microbiology,2012,14(1):129-139.  



[8] JAMI E,ISRAEL A,KOTSER A,et al.Exploring the bovine rumen bacterial community from birth to adulthood[J].ISME Journal,2013,7(6):1069-1079.  



[9] YÁÑEZ-RUIZ D R,ABECIA L,NEWBOLD C J.Manipulating rumen microbiome and fermentation through interventions during early life:a review[J].Frontiers in Microbiology,2015,6:1133.



[10] ZIOLECKI A,BRIGGS C A E.The microflora of the rumen of the young calf:Ⅱ.Source,nature and development[J].Journal of Applied Microbiology,1961,24(2):148-163.



[11] BALDWIN VI R L,MCLEOD K R,KLOTZ J L,et al.Rumen development,intestinal growth and hepatic metabolism in the pre-and postweaning ruminant[J].Journal of Dairy Science,2004,87(Suppl.):E55-E65.



[12] FONTY G,GOUET P,JOUANY J P,et al.Establishment of the microflora and anaerobic fungi in the rumen of lambs[J].Microbiology,1987,133(7):1835-1843.  



[13] MYER P R,KIM M,FREETLY H C,et al.Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers[J].Journal of Microbiological Methods,2016,127:132-140.



[14] FOUTS D E,SZPAKOWSKI S,PURUSHE J,et al.Next generation sequencing to define prokaryotic and fungal diversity in the bovine rumen[J].PLoS One,2012,7(11):e48289.



[15] CHAUCHEYRAS-DURAND F,OSSA F.Review:the rumen microbiome:composition,abundance,diversity,and new investigative tools[J].Professional Animal Scientist,2014,30(1):1-12.  



[16] WANG L Z,XU Q,KONG F L,et al.Exploring the goat rumen microbiome from seven days to two years[J].PLoS One,2016,11(5):e0154354.



[17] ZHANG J,SHI H T,WANG Y J,et al.Effect of dietary forage to concentrate ratios on dynamic profile changes and interactions of ruminal microbiota and metabolites in holstein heifers[J].Frontiers in Microbiology,2017,8:2206.



[18] DIAS J,MARCONDES M I,DE SOUZA S M,et al.Assessing bacterial community dynamics across the gastrointestinal tracts of dairy calves during preweaning development[J].Applied and Environmental Microbiology,2018,84(9):e02675-17.



[19] MALMUTHUGE N,GUAN L L.Understanding host-microbial interactions in rumen:searching the best opportunity for microbiota manipulation[J].Journal of Animal Science and Biotechnology,2017,8:8.



[20] DIAS J,MARCONDES M I,NORONHA M F,et al.Effect of pre-weaning diet on the ruminal archaeal,bacterial,and fungal communities of dairy calves[J].Frontiers in Microbiology,2017,8:1553.



[21] HAN X F,YANG Y X,YAN H L,et al.Rumen bacterial diversity of 80 to 110-day-old goats using 16S rRNA sequencing[J].PLoS One,2015,10(2):e0117811.



[22] MEALE S J,CHAUCHEYRAS-DURAND F,BERENDS H,et al.From pre-to postweaning:transformation of the young calf's gastrointestinal tract[J].Journal of Dairy Science,2017,100(7):5984-5995.  



[23] GUZMAN C E,BEREZA-MALCOLM L T,DE GROEF B,et al.Uptake of milk with and without solid feed during the monogastric phase:effect on fibrolytic and methanogenic microorganisms in the gastrointestinal tract of calves[J].Animal Science Journal,2016,87(3):378-388.  



[24] OIKONOMOU G,TEIXEIRA A G V,FODITSCH C,et al.Fecal microbial diversity in pre-weaned dairy calves as described by pyrosequencing of metagenomic 16S rDNA.Associations of faecalibacterium species with health and growth[J].PLoS One,2013,8(4):e63157.



[25] MAO S Y,ZHANG M L,LIU J H,et al.Characterising the bacterial microbiota across the gastrointestinal tracts of dairy cattle:membership and potential function[J].Scientific Reports,2015,5:16116.



[26] MALMUTHUGE N,GRIEBEL P J,GUAN L L.Taxonomic identification of commensal bacteria associated with the mucosa and digesta throughout the gastrointestinal tracts of preweaned calves[J].Applied and Environmental Microbiology,2014,80(6):2021-2028.  



[27] YEOMAN C J,ISHAQ S L,BICHI E,et al.Biogeographical differences in the influence of maternal microbial sources on the early successional development of the bovine neonatal gastrointestinal tract[J].Scientific Reports,2018,8(1):3197.



[28] ABECIA L,JIMÉNEZ E,MARTÍNEZ-FERNANDEZ G,et al.Natural and artificial feeding management before weaning promote different rumen microbial colonization but not differences in gene expression levels at the rumen epithelium of newborn goats[J].PLoS One,2017,12(8):e0182235.



[29] SASSON G,BEN-SHABAT S K,SEROUSSI E,et al.Heritable bovine rumen bacteria are phylogenetically related and correlated with the cow's capacity to harvest energy from its feed[J].mBio,2017,8(4):e00703-17.



[30] LIU J,BIAN G,SUN D,et al.Starter feeding altered ruminal epithelial bacterial communities and some key immune-related genes' expression before weaning in lambs[J].Journal of Animal Science,2017,95(2):910-921.



[31] KIM Y H,NAGATA R,OHTANI N,et al.Effects of dietary forage and calf starter diet on ruminal pH and bacteria in Holstein calves during weaning transition[J].Frontiers in Microbiology,2016,7:1575.



[32] MEALE S J,LI S C,AZEVEDO P,et al.Development of ruminal and fecal microbiomes are affected by weaning but not weaning strategy in dairy calves[J].Frontiers in Microbiology,2016,7:582.



[33] MEALE S J,LI S C,AZEVEDO P,et al.Weaning age influences the severity of gastrointestinal microbiome shifts in dairy calves[J].Scientific Reports,2017,7(1):198.



[34] LOBERG J M,HERNANDEZ C E,THIERFELDER T,et al.Weaning and separation in two steps-a way to decrease stress in dairy calves suckled by foster cows[J].Applied Animal Behaviour Science,2008,111(3/4):222-234.



[35] COLLADO M C,SANZ Y.Quantification of mucosa-adhered microbiota of lambs and calves by the use of culture methods and fluorescent in situ hybridization coupled with flow cytometry techniques[J].Veterinary Microbiology,2007,121(3/4):299-306.



[36] PAZ H A,ANDERSON C L,MULLER M J,et al.Rumen bacterial community composition in holstein and jersey cows is different under same dietary condition and is not affected by sampling method[J].Frontiers in Microbiology,2016,7:1206.



[37] ZHOU M,CHEN Y H,GRIEBEL P J,et al.Methanogen prevalence throughout the gastrointestinal tract of pre-weaned dairy calves[J].Gut Microbes,2014,5(5):628-638.  



[38] FODITSCH C,VAN VLECK PEREIRA R,GANDA E K,et al.Oral administration of Faecalibacterium prausnitzii decreased the incidence of severe diarrhea and related mortality rate and increased weight gain in preweaned dairy heifers[J].PLoS One,2015,10(12):e0145485.



[39] UYENO Y,SHIGEMORI S,SHIMOSATO T.Effect of probiotics/prebiotics on cattle health and productivity[J].Microbes and Environments,2015,30(2):126-132.  



[40] QADIS A Q,GOYA S,IKUTA K,et al.Effects of a bacteria-based probiotic on ruminal pH,volatile fatty acids and bacterial flora of Holstein calves[J].Journal of Veterinary Medical Science,2014,76(6):877-885.  



[41] KIDO K,TEJIMA S,NAGAYAMA H,et al.Effects of supplementation with cellooligosaccharides on growth performance of weaned calves on pasture[J].Animal Science Journal,2016,87(5):661-665.  



[42] SHEN J S,LIU Z,YU Z T,et al.Monensin and nisin affect rumen fermentation and microbiota differently in vitro[J].Frontiers in Microbiology,2017,8:1111.



[43] DE BARBIERI I,HEGARTY R S,SILVEIRA C,et al.Programming rumen bacterial communities in newborn Merino lambs[J].Small Ruminant Research,2015,129:48-59.



[44] ZHONG R Z,SUN H X,LI G D,et al.Effects of inoculation with rumen fluid on nutrient digestibility,growth performance and rumen fermentation of early weaned lambs[J].Livestock Science,2014,162:154-158.



[45] ABECIA L,MARTÍN-GARCÍA A I,MARTÍNEZ G,et al.Nutritional intervention in early life to manipulate rumen microbial colonization and methane output by kid goats postweaning[J].Journal of Animal Science,2013,91(10):4832-4840.  



[46] LYONS T,BOLAND T,STOREY S,et al.Linseed oil supplementation of lambs' diet in early life leads to persistent changes in rumen microbiome structure[J].Frontiers in Microbiology,2017,8:1656.
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