REVIEW

Research Progress in Pig microRNA's Identification Methods and Functions

  • YANG Binyu ,
  • GAN Ling ,
  • MEI Hongyuan
Expand
  • Department of Veterinary Medicine, Southwest University, Rongchang Campus, Chongqing 402460, China

Received date: 2015-05-12

  Online published: 2015-11-21

Abstract

Besides supplying the significant meat product for human being, pigs also play a vital role in the research fields of human disease as the fabulous animal models. MicroRNA(miRNA)is the important regulatory molecules in living organism. The identification of miRNAs and exploring of miRNAs functions involved in pig's production performance, hormone secretion and animals disease not only improve meat quality and function of swine nutrition metabolism, but also contribute to the development of livestock industry. This paper reviewed the identification methods and function of miRNAs in pigs.

Cite this article

YANG Binyu , GAN Ling , MEI Hongyuan . Research Progress in Pig microRNA's Identification Methods and Functions[J]. Chinese Journal of Animal Nutrition, 2015 , 27(11) : 3352 -3357 . DOI: 10.3969/j.issn.1006-267x.2015.11.006

References

[1] 焦晶凯, 莫蓓红, 高红艳.microRNA功能研究新进展[J].中国畜牧兽医, 2013, 40(2):45-49.
[2] REDDY A M, ZHENG Y, JAGADEESWARAN G, et al.Cloning, characterization and expression analysis of porcine microRNAs[J].BMC Genomics, 2009, 10:65.
[3] CHO I S, KIM J, SEO H Y, et al.Cloning and characterization of microRNAs from porcine skeletal muscle and adipose tissue[J].Molecular Biology Reports, 2010, 37(7):3567-3574.  
[4] SHARBATI-TEHRANI S, KUTZ-LOHROFF B, SCHOLVEN J, et al.Concatameric cloning of porcine microRNA molecules after assembly PCR[J].Biochemical and Biophysical Research Communications, 2008, 375(3):484-489.  
[5] 丛立新, 张金玉, 赵志辉.miRNA的鉴定及检测方法的概述[J].饲料工业, 2014, 35(3):58-60.
[6] SAWERA M, GORODKIN J, CIRERA S, et al.Mapping and expression studies of the mir17-92 cluster on pig Chromosome 11[J].Mammalian Genome, 2005, 16(8):594-598.  
[7] ZHOU B, LIU H L, SHI F X, et al.MicroRNA expression profiles of porcine skeletal muscle[J].Animal Genetics, 2010, 41(5):499-508.  
[8] HUA Y J, TU K, TANG Z Y, et al.Comparison of normalization methods with microRNA microarray[J].Genomics, 2008, 92(2):122-128.  
[9] SHARBATI S, FRIEDLÄNDER M R, SHARBATI J, et al.Deciphering the porcine intestinal microRNA transcriptome[J].BMC Genomics, 2010, 11:275.
[10] PODOLSKA A, KACZKOWSKI B, KAMP BUSK P, et al.MicroRNA expression profiling of the porcine developing brain[J].PLoS One, 2011, 6(1):e14494.
[11] XIE F L, HUANG S Q, GUO K, et al.Computational identification of novel microRNAs and targets in Brassica napus[J].FEBS Letters, 2007, 581(7):1464-1474.  
[12] XIE S S, HUANG T H, SHEN Y, et al.Identification and characterization of microRNAs from porcine skeletal muscle[J].Animal Genetics, 2010, 41(2):179-190.  
[13] LI G X, LI Y J, LI X J, et al.MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing[J].Journal of Cellular Biochemistry, 2011, 112(5):1318-1328.  
[14] LI M, LIU Y, WANG T, et al.Repertoire of porcine microRNAs in adult ovary and testis by deep sequencing[J].International Journal of Biological Sciences, 2011, 7(7):1045-1055.
[15] TIMONEDA O, BALCELLS I, NÙÑEZ J L, et al.MiRNA expression profile analysis in kidney of different porcine breeds[J].PLoS One, 2013, 8(1):e55402.
[16] BAI Y, HUANG J M, LIU G, et al.A comprehensive microRNA expression profile of the backfat tissue from castrated and intact full-sib pair male pigs[J].BMC Genomics, 2014, 15:47.
[17] REDSHAW Z, SWEETMAN D, LOUGHNA P T.The effects of age upon the expression of three miRNAs in muscle stem cells isolated from two different porcine skeletal muscles[J].Differentiation, 2014, 88(4/5):117-123.
[18] YANG Y L, LI Y, LIANG R Y, et al.Dynamic expression of microRNA-127 during porcine prenatal and postnatal skeletal muscle development[J].Journal of Integrative Agriculture, 2014, 13(6):1331-1339.  
[19] CAI Z W, ZHANG L F, JIANG X L, et al.Differential miRNA expression profiles in the Longissimus dorsi muscle between intact and castrated male pigs[J].Research in Veterinary Science, 2015, 99:99-104.
[20] LI H Y, CHEN X, GUAN L Z, et al.MiRNA-181a regulates adipogenesis by targeting tumor necrosis factor-α (TNF-α) in the porcine model[J].PLoS One, 2013, 8(10):e71568.
[21] JEONG B C, KANG I H, KOH J T.MicroRNA-302a inhibits adipogenesis by suppressing peroxisome proliferator-activated receptor γ expression[J].FEBS Letters, 2014, 588(18):3427-3434.  
[22] GU Y R, LI M Z, WANG T, et al.Lactation-related microRNA expression profiles of porcine breast milk exosomes[J].PLoS One, 2012, 7(8):e43691.
[23] CHEN T, XI Q Y, YE R S, et al.Exploration of microRNAs in porcine milk exosomes[J].BMC Genomics, 2014, 15:100.
[24] LIU J Y, YAO W, YAO Y, et al.MiR-92a inhibits porcine ovarian granulosa cell apoptosis by targeting Smad7 gene[J].FEBS Letters, 2014, 588(23):4497-4503.  
[25] YE R S, XI Q Y, QI Q, et al.Differentially expressed miRNAs after GnRH treatment and their potential roles in FSH regulation in porcine anterior pituitary cell[J].PLoS One, 2013, 8(2):e57156.
[26] QI Q E, XI Q Y, YE R S, et al.Alteration of the miRNA expression profile in male porcine anterior pituitary cells in response to GHRH and CST and analysis of the potential roles for miRNAs in regulating GH[J].Growth Hormone & IGF Research, 2015, 25(2):66-74.  
[27] GUO X K, ZHANG Q, GAO L, et al.Increasing expression of microRNA 181 inhibits porcine reproductive and respiratory syndrome virus replication and has implications for controlling virus infection[J].Journal of Virology, 2013, 87(2):1159-1171.  
[28] WANG D, CAO L, XU Z, et al.MiR-125b reduces porcine reproductive and respiratory syndrome virus replication by negatively regulating the NF-κB pathway[J].PLoS One, 2013, 8(2):e55838.
[29] LI L W, WEI Z Z, ZHOU Y J, et al.Host miR-26a suppresses replication of porcine reproductive and respiratory syndrome virus by upregulating type Ⅰ interferons[J].Virus Research, 2015, 195(2):86-94.
[30] ZHANG Q, GUO X K, GAO L, et al.MicroRNA-23 inhibits PRRSV replication by directly targeting PRRSV RNA and possibly by upregulating type Ⅰ interferons[J].Virology, 2014, 450-451:182-195.
[31] WU J, PENG X, ZHOU A, et al.MiR-506 inhibits PRRSV replication in MARC-145 cells via CD151[J].Molecular and Cellular Biochemistry, 2014, 394(1/2):275-281.
[32] HICKS J A, YOO D, LIU H C.Characterization of the microRNAome in porcine reproductive and respiratory syndrome virus infected macrophages[J].PLoS One, 2013, 8(12):e82054.
[33] HOEKE L, SHARBATI J, PAWAR K, et al.Intestinal salmonella typhimurium infection leads to miR-29a induced caveolin 2 regulation[J].PLoS One, 2013, 8(6):e67300.
[34] PODOLSKA A, ANTHON C, BAK M, et al.Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae[J].BMC Genomics, 2012, 13:459.
[35] HUANG J, MA G J, FU L L, et al.Pseudorabies viral replication is inhibited by a novel target of miR-21[J].Virology, 2014, 456-457:319-328.
Outlines

/