[1] COLLADO M C, ISOLAURI E, LAITINEN K, et al.Effect of mother's weight on infant's microbiota acquisition, composition, and activity during early infancy:a prospective follow-up study initiated in early pregnancy[J].The American Journal of Clinical Nutrition, 2010, 92(5):1023-1030.
[2] TAKO E, GLAHN R P, KNEZ M, et al.The effect of wheat prebiotics on the gut bacterial population and iron status of iron deficient broiler chickens[J].Nutrition Journal, 2014, 13:58.
[3] ADKINS P R F, ERICSSON A C, MIDDLETON J R, et al.The effect of intramammary pirlimycin hydrochloride on the fecal microbiome of early-lactation heifers[J].Journal of Dairy Science, 2020, 103(4):3459-3469.
[4] SHIN D, CHANG S Y, BOGERE P, et al.Beneficial roles of probiotics on the modulation of gut microbiota and immune response in pigs[J].PloS One, 2019, 14(8):e0220843.
[5] BÄCKHED F.Programming of host metabolism by the gut microbiota[J].Annals of Nutrition and Metabolism, 2011, 58(Suppl.2):44-52.
[6] KANG D W, PARK J G, ILHAN Z E, et al.Reduced incidence of
Prevotella and other fermenters in intestinal microflora of autistic children[J].PloS One, 2013, 8(7):e68322.
[7] QIN J J, LI R Q, RAES J, et al.A human gut microbial gene catalogue established by metagenomic sequencing[J].Nature, 2010, 464(7285):59-65.
[8] TURNBAUGH P J, HAMADY M, YATSUNENKO T, et al.A core gut microbiome in obese and lean twins[J].Nature, 2009, 457(7228):480-484.
[9] KOENIG J E, SPOR A, SCALFONE N, et al.Succession of microbial consortia in the developing infant gut microbiome[J].Proceedings of the National Academy of Sciences of the United States of America, 2011, 108(Suppl.1):4578-4585.
[10] PALMER C, BIK E M, DIGIULIO D B, et al.Development of the human infant intestinal microbiota[J].PloS Biology, 2007, 5(7):e177.
[11] JURBURG S D, BROUWER M S M, CECCARELLI D, et al.Patterns of community assembly in the developing chicken microbiome reveal rapid primary succession[J].MicrobiologyOpen, 2019, 8(9):e00821.
[12] JIMÉNEZ E, FERNÁNDEZ L, MARÍN M L, et al.Isolation of commensal bacteria from umbilical cord blood of healthy neonates born by cesarean section[J].Current Microbiology, 2005, 51(4):270-274.
[13] GUO C Y, JI S K, YAN H, et al.Dynamic change of the gastrointestinal bacterial ecology in cows from birth to adulthood[J].MicrobiologyOpen, 2020, 9(11):e1119.
[14] DIGIULIO D B, ROMERO R, KUSANOVIC J P, et al.Prevalence and diversity of microbes in the amniotic fluid, the fetal inflammatory response, and pregnancy outcome in women with preterm pre-labor rupture of membranes[J].American Journal of Reproductive Immunology, 2010, 64(1):38-57.
[15] DONG Y, ST CLAIR P J, RAMZY I, et al.A microbiologic and clinical study of placental inflammation at term[J].Obstetrics and Gynecology, 1987, 70(2):175-182.
[16] AAGAARD K, MA J, ANTONY K M, et al.The placenta harbors a unique microbiome[J].Science Translational Medicine, 2014, 6(237):237ra65.
[17] JIMÉNEZ E, MARÍN M L, MARTÍN R, et al.Is meconium from healthy newborns actually sterile?[J].Research in Microbiology, 2008, 159(3):187-193.
[18] 郭昱含.家禽沙门氏菌传播途径及防控措施[J].国外畜牧学(猪与禽), 2019, 39(8):95-98. GUO Y H.
Poultry Salmonella transmission route and prevention and control measures[J].Animal Science Abroad (Pigs and Poultry), 2019, 39(8):95-98.(in Chinese)
[19] AWAD W A, HESS C, HESS M.Re-thinking the chicken-
Campylobacter jejuni interaction:a review[J].Avian Pathology, 2018, 47(4):352-363.
[20] WANKHADE U D, ZHONG Y, KANG P, et al.Maternal high-fat diet programs offspring liver steatosis in a sexually dimorphic manner in association with changes in gut microbial ecology in mice[J].Scientific Reports, 2018, 8(1):16502.
[21] DE JONGE L, BOS H J, VAN LANGEN I M, et al.Antibiotics prescribed before, during and after pregnancy in the Netherlands:a drug utilization study[J].Pharmacoepidemiology and Drug Safety, 2014, 23(1):60-68.
[22] NOGACKA A, SALAZAR N, SUÁREZ M, et al.Impact of intrapartum antimicrobial prophylaxis upon the intestinal microbiota and the prevalence of antibiotic resistance genes in vaginally delivered full-term neonates[J].Microbiome, 2017, 5(1):93.
[23] ALOISIO I, MAZZOLA G, CORVAGLIA L T, et al.Influence of intrapartum antibiotic prophylaxis against group B
Streptococcus on the early newborn gut composition and evaluation of the anti-
Streptococcus activity of
Bifidobacterium strains[J].Applied Microbiology and Biotechnology, 2014, 98(13):6051-6060.
[24] COX L M, YAMANISHI S, SOHN J, et al.Altering the intestinal microbiota during a critical developmental window has lasting metabolic consequences[J].Cell, 2014, 158(4):705-721.
[25] BEAUMONT M, CAUQUIL L, BERTIDE A, et al.Gut microbiota-derived metabolite signature in suckling and weaned piglets[J].Journal of Proteome Research, 2021, 20(1):982-994.
[26] HU Y, WANG L D, SHAO D, et al.Selectived and reshaped early dominant microbial community in the cecum with similar proportions and better homogenization and species diversity due to organic acids as AGP alternatives mediate their effects on broilers growth[J].Frontiers in Microbiology, 2019, 10:2948.
[27] FOUHY F, GUINANE C M, HUSSEY S, et al.High-throughput sequencing reveals the incomplete, short-term recovery of infant gut microbiota following parenteral antibiotic treatment with ampicillin and gentamicin[J].Antimicrobial Agents and Chemotherapy, 2012, 56(11):5811-5820.
[28] MOORE A M, AHMADI S, PATEL S, et al.Gut resistome development in healthy twin pairs in the first year of life[J].Microbiome, 2015, 3:27.
[29] LYNN M A, TUMES D J, CHOO J M, et al.Early-life antibiotic-driven dysbiosis leads to dysregulated vaccine immune responses in mice[J].Cell Host & Microbe, 2018, 23(5):653-660.e5.
[30] PANIGRAHI P, PARIDA S, PRADHAN L, et al.Long-term colonization of a
Lactobacillus plantarum synbiotic preparation in the neonatal gut[J].Journal of Pediatric Gastroenterology and Nutrition, 2008, 47(1):45-53.
[31] ZHANG S, ZHONG G, SHAO D, et al.Dietary supplementation with
Bacillus subtilis promotes growth performance of broilers by altering the dominant microbial community[J].Poultry Science, 2021, 100(3):100935.
[32] SCALABRIN D M F, MITMESSER S H, WELLING G W, et al.New prebiotic blend of polydextrose and galacto-oligosaccharides has a bifidogenic effect in young infants[J].Journal of Pediatric Gastroenterology and Nutrition, 2012, 54(3):343-352.
[33] GONZÁLEZ R, KLAASSENS E S, MALINEN E, et al.Differential transcriptional response of
Bifidobacterium longum to human milk, formula milk, and galactooligosaccharide[J].Applied and Environmental Microbiology, 2008, 74(15):4686-4694.
[34] KIM E R, CHANG D K.Colorectal cancer in inflammatory bowel disease:the risk, pathogenesis, prevention and diagnosis[J].World Journal of Gastroenterology, 2014, 20(29):9872-9881.
[35] ARRIETA M C, STIEMSMA L T, AMENYOGBE N, et al.The intestinal microbiome in early life:health and disease[J].Frontiers in Immunology, 2014, 5:427.
[36] KHAN S, WALIULLAH S, GODFREY V, et al.Dietary simple sugars alter microbial ecology in the gut and promote colitis in mice[J].Science Translational Medicine, 2020, 12(567):eaay6218.
[37] HALL A B, YASSOUR M, SAUK J, et al.A novel
Ruminococcus gnavus clade enriched in inflammatory bowel disease patients[J].Genome Medicine, 2017, 9(1):103.
[38] KOLHO K L, KORPELA K, JAAKKOLA T, et al.Fecal microbiota in pediatric inflammatory bowel disease and its relation to inflammation[J].The American Journal of Gastroenterology, 2015, 110(6):921-930.
[39] ANDOH A, IMAEDA H, AOMATSU T, et al.Comparison of the fecal microbiota profiles between ulcerative colitis and Crohn's disease using terminal restriction fragment length polymorphism analysis[J].Journal of Gastroenterology, 2011, 46(4):479-486.
[40] PIMENTEL M, LEMBO A.Microbiome and its role in irritable bowel syndrome[J].Digestive Diseases and Sciences, 2020, 65(3):829-839.
[41] KLEM F, WADHWA A, PROKOP L J, et al.Prevalence, risk factors, and outcomes of irritable bowel syndrome after infectious enteritis:a systematic review and meta-analysis[J].Gastroenterology, 2017, 152(5):1042-1054.e1.
[42] DE PALMA G, LYNCH M D J, LU J, et al.Transplantation of fecal microbiota from patients with irritable bowel syndrome alters gut function and behavior in recipient mice[J].Science Translational Medicine, 2017, 9(379):eaaf6397.
[43] MAHARSHAK N, RINGEL Y, KATIBIAN D, et al.Fecal and mucosa-associated intestinal microbiota in patients with diarrhea-predominant irritable bowel syndrome[J].Digestive Diseases and Sciences, 2018, 63(7):1890-1899.
[44] NG S C, LAM E F C, LAM T T Y, et al.Effect of probiotic bacteria on the intestinal microbiota in irritable bowel syndrome[J].Journal of Gastroenterology and Hepatology, 2013, 28(10):1624-1631.
[45] LAFOREST-LAPOINTE I, ARRIETA M C.Patterns of early-life gut microbial colonization during human immune development:an ecological perspective[J].Frontiers in Immunology, 2017, 8:788.
[46] NANCE C L, DENISKIN R, DIAZ V C, et al.The role of the microbiome in food allergy:a review[J].Children, 2020, 7(6):50.
[47] ZHAO W, HO H E, BUNYAVANICH S.The gut microbiome in food allergy[J].Annals of Allergy, Asthma & Immunology, 2019, 122(3):276-282.
[48] HUANG Y J, MARSLAND B J, BUNYAVANICH S, et al.The microbiome in allergic disease:current understanding and future opportunities-2017 PRACTALL document of the American academy of allergy, asthma & immunology and the European academy of allergy and clinical immunology[J].The Journal of Allergy and Clinical Immunology, 2017, 139(4):1099-1110.
[49] NOVAL R M, BURTON O T, WISE P, et al.A microbiota signature associated with experimental food allergy promotes allergic sensitization and anaphylaxis[J].The Journal of Allergy and Clinical Immunology, 2013, 131(1):201-212.
[50] 赵新凤.肠道菌群在食物过敏发病机制中的作用研究[D].硕士学位论文.重庆:重庆医科大学, 2014. ZHAO X F.Study on the effects of intestinal flora on the pathogenesis of food allergies[D].Master's Thesis.Chongqing:Chongqing Medical University, 2014.(in Chinese)
[51] 张倩雲.早期日粮添加大豆浓缩蛋白对肉鸡生产性能、氨基酸表观消化率、肠道发育和肠道微生物及其代谢产物的影响[D].硕士学位论文.南宁:广西大学, 2021. ZHANG Q Y.Effects of soy protein concentrate in starter phase diet on growth performance, apparent digestibility of amino acids, intestinal development, intestinal microorganisms and metabolites of broilers[D].Master's Thesis.Nanning:Guangxi University, 2021.(in Chinese)
[52] BÄCKHED F, DING H, WANG T, et al.The gut microbiota as an environmental factor that regulates fat storage[J].Proceedings of the National Academy of Sciences of the United States of America, 2004, 101(44):15718-15723.
[53] STAPPENBECK T S, HOOPER L V, GORDON J I.Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells[J].Proceedings of the National Academy of Sciences of the United States of America, 2002, 99(24):15451-15455.
[54] BORRE Y E, O'KEEFFE G W, CLARKE G, et al.Microbiota and neurodevelopmental windows:implications for brain disorders[J].Trends in Molecular Medicine, 2014, 20(9):509-518.
[55] DESBONNET L, CLARKE G, TRAPLIN A, et al.Gut microbiota depletion from early adolescence in mice:implications for brain and behaviour[J].Brain, Behavior, and Immunity, 2015, 48:165-173.
[56] BERCIK P, DENOU E, COLLINS J, et al.The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice[J].Gastroenterology, 2011, 141(2):599-609.E3.
[57] 杨智国.热应激对鸡肠道微生物的影响及调控措施[J].山东畜牧兽医, 2019, 40(9):61-65. YANG Z G.The effect of heat stress on the intestinal microbes of chickens and the control measures[J].Shandong Journal of Animal Science and Veterinary Medicine, 2019, 40(9):61-65.(in Chinese)
[58] HU Y, CHEN W W, LIU H X, et al.Genetic differences in ChTLR15 gene polymorphism and expression involved in
Salmonella enterica natural and artificial infection respectively, of Chinese native chicken breeds, with a focus on sexual dimorphism[J].Avian Pathology, 2016, 45(1):13-25.
[59] ZHU L H, LIAO R R, WU N, et al.Heat stress mediates changes in fecal microbiome and functional pathways of laying hens[J].Applied Microbiology and Biotechnology, 2019, 103(1):461-472.
[60] CHEN F, ZHANG H, ZHAO N, et al.Effect of chlorogenic acid on intestinal inflammation, antioxidant status, and microbial community of young hens challenged with acute heat stress[J].Animal Science Journal, 2021, 92(1):e13619.
