1 材料与方法
1.1 伦理声明
1.2 试验设计和样品采集
表1 基础饲粮组成及营养水平(风干基础)Table 1 Composition and nutrient levels of basal diets (air-dry basis) % |
| 项目 Items | 1~28日龄 1 to 28 days of age | 29~49日龄 29 to 42 days of age | |||
|---|---|---|---|---|---|
| 原料Ingredients | |||||
| 玉米Corn | 61.70 | 66.40 | |||
| 豆粕Soybean meal | 25.70 | 20.60 | |||
| 玉米蛋白粉Corn gluten meal | 4.00 | 4.00 | |||
| 玉米干酒糟及其可溶物Corn DDGS | 3.00 | 3.00 | |||
| 大豆油Soybean oil | 1.00 | 1.50 | |||
| 石粉Limestone | 1.30 | 1.40 | |||
| 磷酸氢钙CaHPO4 | 1.50 | 1.30 | |||
| 氯化钠NaCl | 0.26 | 0.26 | |||
| 赖氨酸Lys | 0.38 | 0.32 | |||
| 蛋氨酸Met | 0.20 | 0.18 | |||
| 苏氨酸Thr | 0.06 | 0.08 | |||
| 氯化胆碱Choline chloride | 0.08 | 0.10 | |||
| 预混料Premix | 0.821) | 0.862) | |||
| 合计Total | 100.00 | 100.00 | |||
| 营养水平Nutrient levels3) | |||||
| 代谢能ME/(MJ/kg) | 12.14 | 12.43 | |||
| 粗蛋白质CP | 19.85 | 17.42 | |||
| 钙Ca | 0.90 | 0.86 | |||
| 总磷TP | 0.62 | 0.53 | |||
| 赖氨酸Lys | 1.13 | 1.02 | |||
| 蛋氨酸Met | 0.48 | 0.45 |
1)预混料为每千克饲粮提供The premix provided the following per kg of diets:VA 9 900 IU,VD3 1 800 IU,VE 38 IU,VK3 3.15 mg,VB1 2.7 mg,VB2 6.75 mg,VB6 4.5 mg,VB12 31.5 μg,生物素 biotin 0.23 mg,泛酸钙 calcium pantothenate 15.75 mg,叶酸 folic acid 1.1 mg,烟酸 nicotinic acid 45 mg,Fe 150 mg,Cu 19 mg,Mn 132 mg,Zn 110 mg,I 0.41 mg,Se 0.49 mg。 3)代谢能为计算值,其余均为实测值。ME was a calculated value, while the others were measured values. | |
2)预混料为每千克饲粮提供The premix provided the following per kg of diets:VA 9 240 IU,VD3 1 680 IU,VE 35.7 IU,VK3 2.94 mg,VB1 2.52 mg,VB2 6.3 mg,VB6 4.2 mg,VB12 29.4 μg,生物素 biotin 0.21 mg,泛酸钙 calcium pantothenate 14.7 mg,叶酸 folic acid 1.05 mg,烟酸 nicotinic acid 42 mg,Fe 135 mg,Cu 15 mg,Mn 110 mg,Zn 114 mg,I 0.53 mg,Se 0.5 mg。 |
1.3 生长性能测定
1.4 免疫器官指数、肠道组织形态学检测
1.5 血清免疫指标检测
1.6 DNA提取和宏基因组测序
1.7 数据统计分析
2 结果
2.1 PLP对黄羽肉鸡生长性能的影响
表2 PLP对黄羽肉鸡生长性能的影响Table 2 Effects of PLP on growth performance of yellow-feathered broilers |
| 项目Items | 对照组Control group | PLP组PLP group | P值P-value |
|---|---|---|---|
| 初重IBW/g | 35.20±0.79 | 35.20±0.79 | 1.000 |
| 末重FBW/g | 1 893.50±63.90b | 2 043.50±92.11a | <0.001 |
| 平均日增重ADG/g | 37.92±1.31b | 40.99±1.89a | <0.001 |
| 平均日采食量ADFI/g | 84.62±2.43b | 88.36±3.10a | 0.008 |
| 料重比F/G | 2.23±0.03a | 2.16±0.04b | <0.001 |
| 死亡率Mortality/% | 2.00 | 1.50 |
同行数据肩标无字母或相同字母表示差异不显著(P>0.05),不同小写字母表示差异显著(P<0.05)。下表同。 | |
In the same row, values with no letter or the same letter superscripts mean no significant difference (P>0.05), while with different small letter superscripts mean significant difference (P<0.05). The same as below. |
2.2 PLP对黄羽肉鸡免疫器官指数的影响
表3 PLP对黄羽肉鸡免疫器官指数的影响Table 3 Effects of PLP on immune organ indexes of yellow-feathered broilers mg/g |
| 项目 Items | 日龄 Days of age | 对照组 Control group | PLP组 PLP group | P值 P-value |
|---|---|---|---|---|
法氏囊指数Fabricius index | 21 | 2.58±0.24b | 3.33±0.28a | 0.004 |
| 49 | 2.11±0.76 | 2.42±0.43 | 0.450 | |
脾脏指数Spleen index | 21 | 1.24±0.26 | 1.64±0.50 | 0.199 |
| 49 | 1.63±0.37 | 1.60±0.26 | 0.872 | |
肝脏指数Liver index | 21 | 30.19±2.95 | 38.13±6.56 | 0.061 |
| 49 | 21.59±1.83 | 21.56±0.82 | 0.971 |
2.3 PLP对黄羽肉鸡十二指肠形态的影响
表4 PLP对黄羽肉鸡十二指肠形态的影响Table 4 Effects of PLP on duodenal morphology of yellow-feathered broilers |
| 项目 Items | 日龄 Days of age | 对照组 Control group | PLP组 PLP group | P值 P-value |
|---|---|---|---|---|
绒毛高度Villous height/μm | 21 | 1 226.98±150.44b | 1 502.38±206.82a | <0.001 |
| 49 | 1 543.51±135.53b | 1 863.87±146.08a | 0.030 | |
隐窝深度Crypt depth/μm | 21 | 178.75±41.76 | 163.89±39.57 | 0.326 |
| 49 | 226.00±40.86 | 241.78±20.01 | 0.505 | |
绒毛高度与隐窝深度比值V/C ratio | 21 | 7.12±1.35b | 9.63±2.68a | 0.004 |
| 49 | 6.74±0.71 | 7.70±0.94 | 0.123 |
2.4 PLP对黄羽肉鸡血清免疫指标的影响
表5 PLP对黄羽肉鸡血清免疫指标的影响Table 5 Effects of PLP on serum immune indexes of yellow-feathered broilers |
| 项目 Items | 日龄 Days of age | 对照组 Control group | PLP组 PLP group | P值 P-value |
|---|---|---|---|---|
总蛋白TP/(μg/mL) | 21 | 1 349.13±57.23b | 1 456.67±72.76a | 0.017 |
| 49 | 1 238.61±35.89b | 1 363.33±97.13a | 0.016 | |
免疫球蛋白G IgG/(μg/mL) | 21 | 1 319.55±86.96 | 1 560.45±291.83 | 0.119 |
| 49 | 1 246.82±142.00b | 1 650.23±349.88a | 0.032 | |
免疫球蛋白A IgA/(μg/mL) | 21 | 327.61±21.52b | 355.51±14.35a | 0.025 |
| 49 | 303.31±28.90b | 338.74±23.43a | 0.042 | |
白细胞介素-4 IL-4/(pg/mL) | 21 | 95.72±10.77a | 73.29±9.49b | 0.003 |
| 49 | 65.75±9.24 | 74.46±7.19 | 0.099 | |
γ-干扰素IFN-γ/(pg/mL) | 21 | 67.29±4.24 | 67.48±6.55 | 0.957 |
| 49 | 63.33±5.22 | 58.93±4.68 | 0.199 |
2.5 PLP对黄羽肉鸡盲肠微生物组成的影响
2.5.1 组间基因数目分布情况
2.5.2 PLP对黄羽肉鸡盲肠微生物相对丰度和α多样性的影响
图4 属水平前30显著差异微生物热图及显著差异代表菌属Rhizoclosmatium:根梭菌属;Confluentibacter:汇合杆菌属;Zancudomyces:赞库菌属;Holdemania:霍尔德曼氏菌属;Hafnia:哈夫尼菌属;Beggiatoa:贝吉亚托菌属;Anaeromassilibacillus:厌氧马赛杆菌属;Roseburia:罗氏菌属;Isachenkonia:伊萨陈孔菌属;Desulfocurvibacter:脱硫杆菌属;Thermaerobacter:嗜热菌属;Monascus:红曲霉属;unclassified:未分类的;Eisenbergiella:艾森伯格氏菌属;Afipia:阿菲波菌属;Hyphomonas:生丝单胞菌属;Hungateiclostridium:匈牙利梭菌属;Halapricum:盐堆属;Pseudoruminococcus:假瘤胃球菌属;Clostridium:梭菌属;Natribacillus:硝杆菌属;Tepidibacter:温热杆菌属。 图A中横坐标表示不同组别的个体编号;图B和图C中*表示对照组和PLP组之间存在显著差异(P<0.05)。图7、图8、图9、图10和图12同。In figure A, the abscissa represents the individual numbers of the different groups; in figure B and figure C, * indicated significant difference between control group and PLP group (P<0.05). The same as Fig.7, Fig.8, Fig.9, Fig.10 and Fig.12. Fig.4 Top 30 significantly different microbial heat map at genus level and significant differences representing bacterial genera |
图5 线性判断分析图(A,LDA评分>2)和进化分支图(B)g_Clostridium:梭菌属;g_Anaeromassilibacillus:厌氧马赛杆菌属;s_Anaeromassilibacillus sp. An250:厌氧马赛杆菌属未分类种An250;g_Lachnoclostridium:毛梭菌属;s_Sharpea azabuensis:阿扎夏普氏菌;g_Sharpea:普氏菌属;s_Faecalibacterium sp. An121:粪杆菌属未分类种An121;s_Clostridium symbiosum:共生梭菌;o_Rhodospirillales:红螺菌目;s_Lachnoclostridium sp. An14:毛梭菌属未分类种An14;c_Alphaproteobacteria:α-变形杆菌纲;s_Flavonifractor sp. An10:解黄酮菌属未分类种An10;s_Pseudoflavonifractor sp. An187:伪黄酮菌属未分类种An187;s_Clostridium scindens:梭状芽孢杆菌;s_Gemmiger sp. An50:芽殖菌属未分类种An50;s_Clostridium minihomine:微小梭菌;s_Pseudoflavonifractor sp. NSJ_25:伪黄酮菌属未分类种NSJ_25;g_Christensenella:克里斯滕森菌属;f_Christensenellaceae:克里斯滕森菌科;s_Anaerotignum lactatifermentans:乳酸厌氧菌;s_Pseudoflavonifractor sp. An85:伪黄酮菌属未分类种An85;s_Anaeromassilibacillus sp. Marseille_P3371:厌氧马赛杆菌属未分类种Marseille_P3371;s_Anaeromassilibacillus sp. An172:厌氧马赛杆菌属未分类种An172;s_Christensenella sp. NSJ_35:克里斯滕森菌属未分类种NSJ_35;s_Clostridium leptum_CAG_27:柔嫩梭菌CAG_27株;s_Anaeromassilibacillus sp. An200:厌氧马赛杆菌属未分类种An200;s_Clostridium sp. CAG_1013:梭菌属未分类种CAG_1013;g_Collinsella:柯林斯氏菌属;s_Ruminococcus lactaris:乳瘤胃球菌;s_Caproiciproducens galactitolivorans:半乳糖己酸菌;s_Eubacterium sp. An3:真细菌属未分类种An3;s_Clostridium jeddahense:吉达氏梭菌;s_Eubacterium ramulus:细枝真杆菌;s_Flavonifractor sp. An112:解黄酮菌属未分类种An112;s_Dorea longicatena:长链多灵菌;s_Clostridium sp. 26_22:梭菌属未分类种26_22;s_Ruminococcus flavefaciens:黄化瘤胃球菌;s_Pseudoflavonifractor sp. An44:伪黄酮菌属未分类种An44;s_Ruminococcus bromii:布氏瘤胃球菌;s_Bacteroides fluxus:氟拟杆菌。 Fig.5 Linear discriminant analysis diagram (A, LDA score>2) and cladogram (B) |
表6 α多样性结果Table 6 α-diversity results |
| 项目Items | 对照组Control group | PLP组PLP group | P值P-value |
|---|---|---|---|
| Chao1指数Chao1 index | 8 425.43±556.85 | 8 711.69±806.66 | 0.583 |
| Shannon指数Shannon index | 4.54±0.64 | 5.03±0.32 | 0.239 |
| Simpson指数Simpson index | 0.95±0.03 | 0.97±0.01 | 0.325 |
| ACE指数ACE index | 8 289.14±548.94 | 8 579.77±797.14 | 0.573 |
2.5.3 PLP对黄羽肉鸡盲肠微生物群功能的影响
图6 KEGG功能注释Cell growth and death:细胞生长和死亡;Cell motility:细胞运动性;Cellular community-eukaryotes:细胞社群-真核生物;Cellular community-prokaryotes:细胞社群-原核生物;Transport and catabolism:转运和代谢;Signal transduction:信号转导;Signaling molecules and interaction:信号分子和相互作用;Membrane transport:膜输送,膜转运;Folding,sorting and degradation:折叠、整理和降解;Translation:翻译;Replication and repair:复制和修复;Transcription:转录;Cancer: specific types:癌症:特定类型;Infectious disease:parasitic:传染病:寄生虫;Neurodegenerative disease:神经变性疾病;Drug resistance:antimicrobial:耐药性:抗菌;Infectious disease:viral:传染性疾病:病毒性;Cardiovascular disease:心血管病;Drug resistance:antineoplastic:耐药性:抗肿瘤;Immune disease:免疫性疾病;Endocrine and metabolic disease:内分泌和代谢性疾病;Cancer:overview:癌症:概述;Substance dependence:药物依赖;Infectious disease: bacterial:传染病:细菌;Biosynthesis of other secondary metabolites:其他次生代谢物的生物合成;Metabolism of other amino acids:其他氨基酸的代谢;Lipid metabolism:类脂(化合)物代谢作用;Glycan biosynthesis and metabolism:糖聚糖的生物合成和代谢;Nucleotide metabolism:核苷酸代谢;Metabolism of cofactors and vitamins:辅助因子和维生素的代谢;Energy metabolism:能量代谢;Amino acid metabolism:氨基酸代谢;Metabolism of terpenoids and polyketides:萜类和聚酮类物质的代谢;Carbohydrate metabolism:碳水化合物代谢;Xenobiotics biodegradation and metabolism:异种生物体的生物降解和代谢;Circulatory system:循环系统;Immune system:免疫系统;Nervous system:神经系统;Development and regeneration:发育和再生;Sensory system:感觉系统;Environmental adaptation:环境适应性;Aging:衰老;Excretory system:排泄系统;Endocrine system:内分泌系统;Digestive system:消化系统。 Fig.6 KEGG function annotation |
图7 t检验有显著差异的代谢通路的相对丰度Fig.7 t-test for relative abundance of metabolic pathway with significant difference |
图8 t检验有显著差异的EC的相对丰度Fig.8 t-test for relative abundances of EC with significant differences |
图9 t检验有显著差异的KO的相对丰度Fig.9 t-test for relative abundances of KO with significant differences |
图11 CAZy功能注释AAs:辅助模块酶类 auxiliary activities;CEs:碳水化合物酯酶类 carbohydrate esterases;CBMs:碳水化合物结合模块 carbohydrate-binding modules;GHs:糖苷水解酶 glycoside hydrolases;GTs:糖基转移酶类 glycosyl transferases;PLs:多糖裂合酶类 polysaccharide lyases。 Fig.11 CAZy functional annotation |
2.5.4 PLP组黄羽肉鸡盲肠关键差异微生物与生长性能指标、十二指肠形态指标和血清免疫指标的相关性分析
图13 盲肠关键差异微生物与生长性能指标、十二指肠形态指标和血清免疫指标的相关性分析Trueperella:隐秘杆菌属;Hathewaya:哈撒韦氏菌属;Beggiatoa:贝吉亚托菌属;Desulfocurvibacter:脱硫杆菌属;TP:血清总蛋白含量 serum TP content;V/C:十二指肠V/C值 duodenal V/C ratio;血清IgG含量:serum IgG content;BW:体重(49日龄) body weight (49 days of age);血清IgA含量:serum IgA content。 *表示显著相关(P<0.05)。* mean significant correlation (P<0.05). Fig.13 Correlation analysis of cecal key differential microorganisms with growth performance indexes, duodenal morphology indexes and serum immune indexes |
