1 材料与方法
1.1 试验设计
1.2 饲养管理
1.3 样品采集
1.4 血浆代谢物测定
1.5 LC-MS/MS分析
1.5.1 色谱分离
1.5.2 数据处理和分析
2 结果与分析
2.1 高日增重和低日增重奶公犊血浆代谢物多元统计分析
图1 高日增重和低日增重奶公犊血浆代谢物多元统计分析图A:质控样本的PCA得分图;B:OPLS-DA分析模型的得分图;C:OPLS-DA置换检验图。R2Y表示模型对Y矩阵的解释率,Q2表示模型预测能力。 Fig.1 Multivariate statistical analysis chart of plasma metabolites of dairy bull calves with high daily weight gain and low daily weight gain A: PCA score graph of quality control samples; B: score graph of OPLS-DA analysis model; C: OPLS-DA permutation test graph. R2Y indicates the explanation rate of the model on Y matrix; Q2 indicate the predictive power of the model. |
2.2 高日增重和低日增重奶公犊血浆代谢物分类
2.3 高日增重和低日增重奶公犊血浆差异代谢物分析
图3 高日增重和低日增重奶公犊血浆差异代谢物筛选A:差异代谢物火山图 differential metabolite volcano plot;B:VIP差异倍数和VIP图(前30) VIP multiplicity of difference and VIP plot (top 30)。 VIP:变量投影重要性 variable importance in projection;P:P值 P-value;Fold change:差异倍数;Down-regulated:下调;Insignificant change:无显著变化;Up-regulated:上调;Dodecatetraenoic acid isobutylamide, (2E,4E):十二碳四烯酸异丁酰胺;3-acetyl-4-hydroxy-6-methyl-2H-pyran-2-one:3-乙酰基-4-羟基-6-甲基-2H-吡喃-2-酮;5-[(1-iminoethyl)amino]-2-aminopentanoic acid:5-[(1-氨基乙基)氨基]-2-氨基戊酸;2-(4-hydroxyquinazolin-2-ylthio)-N-(4-methylphenyl)acetamide:2-(4-羟基喹唑啉-2-硫基)-N-(4-甲基苯基)乙酰胺;beta-D-glucopyranoside, 5-(hydroxymethyl)-2-(1-methylethyl)phenyl:β-D-吡喃葡萄糖苷,5-(羟甲基)-2-(1-甲基乙基)苯基。 Fig.3 Screening of plasma differential metabolites of milk bull calves with high daily weight gain and low daily weight gain |
表1 高日增重和低日增重奶公犊血浆中表达上调的差异代谢物Table 1 Plasma differential metabolites with up-regulated expression of milk bull calves with high daily weight gain and low daily weight gain |
| 差异代谢物 Differential metabolites | 变量投影 重要性 VIP | log2(差异 倍数) log2(FC) | P值 P-value | 差异代谢物 Differential metabolites | 变量投影 重要性 VIP | log2(差异 倍数) log2(FC) | P值 P-value | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 缬氨酰异亮氨酸Valylisoleucine | 2.94 | 0.85 | <0.001 | N-甲基十二胺N-methyldodecylamine | 2.21 | 0.38 | 0.032 | ||||||
| 5-[(1-氨基乙基)氨基]-2-氨基戊酸 5-[(1-iminoethyl)amino]-2-aminopentanoic acid | 2.78 | 1.83 | 0.001 | 3,4,5-三甲氧基肉桂醛 3,4,5-trimethoxycinnamic aldehyde | 1.79 | 0.22 | 0.240 | ||||||
| 亮氨酰甘氨酸Leucylglycine | 2.50 | 1.64 | 0.004 | 正苯胺酸Orthanilic acid | 1.95 | 0.15 | 0.024 | ||||||
| 对羟基苯甲酸4-nitrophenol | 1.98 | 2.80 | 0.011 | N-果糖基异亮氨酸N-fructosyl isoleucine | 1.90 | 0.48 | 0.024 | ||||||
| 邻苯二甲酸二乙酯Diethyl phthalate | 2.05 | 4.19 | 0.008 | 特拉唑嗪Terazosin | 1.44 | 0.30 | 0.035 | ||||||
| 关那苯Guanabenz | 2.13 | 0.93 | 0.010 | 2,6-二羟基苯甲酸酯2,6-dihydroxybenzoate | 1.64 | 5.30 | 0.036 | ||||||
| 对羟基苯甲酸4-hydroxybenzoic acid | 1.98 | 2.80 | 0.011 | 亮丙氨酸Leucylalanine | 1.78 | 0.93 | 0.039 | ||||||
| 苯丙氨酸果糖基N-fructosyl phenylalanine | 1.50 | 0.33 | 0.040 | 缬氨酰-亮氨酸Val-Leu | 1.60 | 1.29 | 0.042 | ||||||
| 正亮氨酸Norleucine | 1.95 | 0.37 | 0.011 | 谷氨酰亮氨酸Glutamylleucine | 1.74 | 0.37 | 0.025 | ||||||
| 2-氨基-2-噻唑啉-4-羧酸 2-amino-2-thiazoline-4-carboxylic acid | 1.96 | 0.19 | 0.013 | 3-亚甲基吲哚烯酸 3-methylene-indolenine | 1.57 | 0.18 | 0.025 | ||||||
| 丙酰基肉碱Propionylcarnitine | 1.93 | 0.62 | 0.014 | 2-羟基苯乙酸2-hydroxyphenylacetic acid | 1.70 | 1.50 | 0.030 | ||||||
| 脱氢鞘氨醇Dehydrophytosphingosine | 1.96 | 0.93 | 0.014 | 三唑酮Triadimefon | 1.26 | 1.08 | 0.030 | ||||||
| 二氟氯乙酸Chlorodifluoroacetic acid | 1.85 | 1.15 | 0.014 | 谷氨酰胺Glutamine | 2.48 | 0.23 | 0.033 | ||||||
| N-阿魏酰辛多巴胺N-feruloyloctopamine | 1.76 | 0.90 | 0.017 | 二烯丙基硫醚Diallyl sulfide | 1.08 | 0.37 | 0.033 | ||||||
| 马尿酸Hippuric acid | 1.61 | 2.59 | 0.033 | 吡格列酮Pioglitazone | 1.77 | 0.90 | 0.034 | ||||||
| N-(5-氟-3-甲基-1H-吲哚-1-基)-4-甲基- 2-(吡啶-2-基)嘧啶-5-甲酰胺 N-(5-fluoro-3-methyl-1H-indol-1-yl)-4-methyl-2-(pyridin-2-yl)pyrimidine-5-carboxamide | 1.81 | 0.77 | 0.021 | N-[(1E)-2-(2-羟基萘基)-1-氮杂乙烯基]-2-(3,5-二氧代(2H,4H-1,2,4-三嗪-6-基))乙酰胺 N-[(1E)-2-(2-hydroxynaphthyl)-1-azavinyl]-2-(3,5-dioxo(2H,4H-1,2,4-triazin-6-y l))acetamide | 1.81 | 0.93 | 0.031 | ||||||
| 1,4-二羟基十七碳-16-烯-2-醇乙酸酯 1,4-dihydroxyheptadec-16-en-2-yl acetate | 1.62 | 0.59 | 0.042 | 3-氨基-2,2-二甲基丙酸 3-amino-2,2-dimethylpropanoic acid | 1.37 | 0.23 | 0.046 | ||||||
| 双乙酰基二氨基戊烷 Bis-(acetyl)diaminopentane | 1.81 | 1.02 | 0.044 | 对甲酚p-cresol | 1.79 | 0.22 | 0.046 | ||||||
| 草氨酸Oxamic acid | 1.47 | 1.35 | 0.048 | 5-羟基吲哚乙酸酯5-hydroxyindoleacetate | 1.56 | 0.74 | 0.048 | ||||||
| 2-氨基-4-(3-羟基苯基)-5 -氧代-6-氢-4H-吡喃[3,2-c]喹啉-3-腈 2-amino-4-(3-hydroxyphenyl)-5 -oxo-6-hydro-4H-pyrano[3,2-c]quinoline-3-carbonit rile | 1.65 | 0.53 | 0.049 | β-D-吡喃葡萄糖苷,5-(羟甲基)-2-(1-甲基乙基)苯基 Beta-D-glucopyranoside, 5-(hydroxymethyl)-2-(1-methylethyl)phenyl | 1.99 | 0.72 | 0.049 | ||||||
| 过氧胆酸Hyodeoxycholic acid | 1.95 | 2.05 | 0.049 | 硝酸匹罗卡品Pilocarpine nitrate | 1.44 | 0.33 | 0.049 | ||||||
表2 高日增重和低日增重奶公犊血浆中表达下调的差异代谢物Table 2 Plasma differential metabolites with down-regulated expression of milk bull calves with high daily weight gain and low daily weight gain |
| 差异代谢物 Differential metabolites | 变量投影 重要性VIP | log2(差异 倍数) log2(FC) | P值 P-value | 差异代谢物 Differential metabolites | 变量投影 重要性VIP | log2(差异 倍数) log2(FC) | P值 P-value | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 十二碳四烯酸异丁酰胺 Dodecatetraenoic acid isobutylamide | 2.87 | -0.74 | 0.007 | 异戊酸甲酯 Ketoisovalerate | 2.86 | -0.56 | <0.001 | ||||||||
| Oct-5-烯二酰基肉毒碱 Oct-5-enedioylcarnitine | 2.84 | -0.82 | 0.003 | 吲哚-3-乙酸 Indole-3-acetic acid | 2.51 | -1.44 | 0.017 | ||||||||
| 牛磺脱氧胆酸 Taurodeoxycholic acid | 2.11 | -1.19 | 0.014 | 2-(甲基亚乙基)丁二酸 2-(methylethylidene)butanedioic acid | 2.41 | -0.91 | 0.011 | ||||||||
| 3-乙酰基-4-羟基-6-甲基-2H-吡喃-2-酮 3-acetyl-4-hydroxy-6-methyl-2H-pyran-2-one | 2.25 | -0.18 | 0.010 | 顺式-4-辛烯二酸 Cis-4-octenedioic acid | 2.23 | -0.70 | 0.029 | ||||||||
| 1-甲基组氨酸 1-methylhistidine | 2.14 | -0.31 | 0.046 | 2-(4-羟基喹唑啉-2-硫基)-N-(4-甲基苯基)乙酰胺 2-(4-hydroxyquinazolin-2-ylthio)-N- (4-methylphenyl)acetamide | 2.12 | -0.42 | 0.037 | ||||||||
| Mmv688509 | 2.12 | -0.69 | 0.002 | 异铅蛋白Isoplumbagin | 2.11 | -0.32 | 0.031 | ||||||||
| 乙酰甘氨酸Acetylglycine | 1.96 | -1.05 | 0.045 | N-丁酰甘氨酸N-butyrylglycine | 1.90 | -0.63 | 0.043 | ||||||||
| 牛磺胆硷酸Taurolithocholic acid | 1.88 | -1.63 | 0.043 | 牛磺鹅去氧胆酸Taurochenodeoxycholic acid | 1.85 | -0.93 | 0.037 | ||||||||
| 黏连抑制剂D Macrosphelide D | 1.84 | -0.85 | 0.031 | 2-异丙基丙二酸2-isopropylmalic acid | 1.81 | -0.83 | 0.032 | ||||||||
| PC(14∶0/20∶3) | 1.72 | -0.53 | 0.015 | 乙基葡萄糖醛酸Ethylglucuronide | 1.63 | -0.82 | 0.040 | ||||||||
| 丁酸,3-甲基-,(1S,4aS,6S,7R,7aS)-7-[(乙酰氧基)甲基]-4-[(beta-D-吡喃葡萄糖氧基)甲基]-1,4a,5,6,7,7a-六氢-6,7-二羟基环戊并[c]吡喃-1-基酯 Butanoic acid, 3-methyl-, (1S,4aS,6S,7R,7aS)-7-[(acetyloxy)methyl]-4-[(beta-D-glucopyranosyloxy)methyl]-1,4a,5,6,7,7a-hexahydro-6,7-dihydroxycyclopenta[c]pyran-1-yl ester | 1.76 | -0.89 | 0.045 | 4-脱氧赤藓酸 4-deoxyerythronic acid | 1.76 | -0.61 | 0.025 | ||||||||
| γ-氨基丁酸GABA | 1.61 | -0.24 | 0.039 | 硫辛酸Lipoic acid | 1.58 | -0.41 | 0.034 | ||||||||
| PFSM-全氟烷基磺酰胺 PFSM-perfluoroalkyl_sulfonamide | 1.57 | -0.85 | 0.034 | LPI(18:0) | 1.43 | -0.19 | 0.044 | ||||||||
| 甲氧基胺Methoxamine | 1.41 | -0.31 | 0.047 | 全氟烷基磺酰胺PFSM-amine | 1.38 | -0.77 | 0.040 | ||||||||
图4 高日增重和低日增重奶公犊差异代谢物聚类分析图N-[(1E)-2-(2-hydroxynaphthyl)-1-azavinyl]-2-(3,5-dioxo(2H,4H-1,2,4-triazin-6-y l)acetamide:N-[(1E)-2-(2-羟基萘基)-1-氮杂乙烯基]-2-(3,5-二酮(2H,4H-1,2,4-三嗪-6-基))乙酰胺;N-(5-Fluoro-3-methyl-1H-indol-1-yl)-4-methyl-2-(pyridin-2-yl)pyrimidine-5-carboxamide:N-(5-氟-3-甲基-1H-吲哚-1-基)-4-甲基-2-(吡啶-2-基)嘧啶-5-甲酰胺;2-amino-4-(3-hydroxyphenyl)-5-oxo-6-hydro-4H-pyrano[2-c]quinoline-3-carbonit rile:2-氨基-4-(3-羟基苯基)-5-氧代-6-氢-4H-吡喃并[2-c]喹啉-3-腈;Butanoic acid, 3-methyl-, (1S,4aS,6S,7R,7aS)-7-[(acetyloxy)methyl]-4-[(beta-D-glucopyranosyloxy)methyl]-1,4a,5,6,7,7a-hexahydro-6,7-dihydroxycyclopenta[c]pyran-1-yl ester:丁酸,3-甲基-(1S,4aS,6S,7R,7aS)-7-[(乙酰氧基)甲基]-4-[(beta-D-吡喃葡萄糖氧基)甲基]-1,4a,5,6,7,7a-六氢-6,7-二羟基环戊并[c]吡喃-1-基酯。 Fig.4 Cluster analysis plot of differential metabolites of milk bull calves with high daily weight gain and low daily weight gain |
2.4 高日增重和低日增重奶公犊血浆差异代谢通路富集分析
2.4.1 KEGG通路富集分析
图5 高日增重和低日增重奶公犊血浆代谢物KEGG分析气泡图Fig.5 KEGG analysis bubble diagram of milk bull calves with high daily weight gain and low daily weight gain |
表3 高日增重和低日增重奶公犊血浆差异代谢物KEGG显著富集通路Table 3 KEGG significant enrichment pathway of differential metabolites of milk bull calves with high daily weight gain and low daily weight gain |
| 代谢通路 Metabolic pathway | 富集系数 Rich factor | 一级代谢通路 Level 1 metabolic pathway | P值 P-value | 代谢通路 Metabolic pathway | 富集系数 Rich factor | 一级代谢通路 Level 1 metabolic pathway | P值 P-value | |
|---|---|---|---|---|---|---|---|---|
| GABA能突触 GABAergic synapse | 75.76 | 生物体系统 Organismal systems | <0.001 | 吗啡成瘾 Morphine addiction | 42.62 | 人类疾病 Human diseases | 0.023 | |
| 缬氨酸、亮氨酸和异亮氨酸的生物合成 Valine, leucine and isoleucine biosynthesis | 29.65 | 代谢 Metabolism | 0.002 | 色氨酸代谢 Tryptophan metabolism | 8.22 | 代谢 Metabolism | 0.024 | |
| 丙氨酸、天门冬氨酸和谷氨酸代谢 Alanine, aspartate and glutamate metabolism | 24.35 | 代谢 Metabolism | 0.003 | 性腺激素分泌 GnRH secretion | 37.88 | 生物体系统 Organismal systems | 0.026 | |
| 氨基酸的生物合成 Biosynthesis of amino acids | 7.99 | 代谢 Metabolism | 0.005 | 胆固醇代谢 Cholesterol metabolism | 34.09 | 生物体系统 Organismal systems | 0.030 | |
| 蛋白质的消化和吸收 Protein digestion and absorption | 14.51 | 生物体系统 Organismal systems | 0.008 | 嘌呤代谢 Purine metabolism | 6.75 | 代谢 Metabolism | 0.034 | |
| 雌激素信号通路 Estrogen signaling pathway | 42.62 | 生物体系统 Organismal systems | 0.023 | 突触小泡循环 Synaptic vesicle cycle | 28.41 | 生物体系统 Organismal systems | 0.035 | |
| 谷氨酸能突触 Glutamatergic synapse | 42.62 | 生物体系统 Organismal systems | 0.023 | 硫辛酸代谢 Lipoic acid metabolism | 26.22 | 代谢 Metabolism | 0.037 | |
| 近端肾小管碳酸氢盐回收 Proximal tubule bicarbonate | 20.05 | 生物体系统 Organismal systems | 0.049 | 尼古丁成瘾 Nicotine addiction | 48.70 | 人类疾病 Human diseases | 0.020 |
